../../tmp/servers/virsirnadb/1991428242
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1412 | 1 | tagagatcatgaccttgat | 19 | |
| NC_001608.3 | Lake Victoria marburgvirus - Musoke, complete genome | 9147 | ................... | 9165 | 100 |
| NC_001608.3 | Lake Victoria marburgvirus - Musoke, complete genome | 732 | ...gc..........____ | 718 | 68 |
| NC_001608.3 | Lake Victoria marburgvirus - Musoke, complete genome | 12493 | .t.........gag..c.. | 12475 | 73 |
| NC_001608.3 | Lake Victoria marburgvirus - Musoke, complete genome | 1542 | __.g.........ac..__ | 1528 | 63 |
| NC_001608.3 | Lake Victoria marburgvirus - Musoke, complete genome | 6323 | _________........._ | 6315 | 47 |
| Z29337.1 | Marburg virus (Popp) NP, VP35, VP40, GP, VP30, VP24, L genes | 9145 | ................... | 9163 | 100 |
| Z29337.1 | Marburg virus (Popp) NP, VP35, VP40, GP, VP30, VP24, L genes | 731 | ...gc..........____ | 717 | 68 |
| Z29337.1 | Marburg virus (Popp) NP, VP35, VP40, GP, VP30, VP24, L genes | 1543 | .c.g.........ac..__ | 1527 | 68 |
| Z29337.1 | Marburg virus (Popp) NP, VP35, VP40, GP, VP30, VP24, L genes | 17287 | _.........a._______ | 17277 | 52 |
| Z29337.1 | Marburg virus (Popp) NP, VP35, VP40, GP, VP30, VP24, L genes | 6322 | _________........._ | 6314 | 47 |
| Z12132.1 | Marburg virus genes for vp35, vp40, vp30, vp24, glycoprotein, nucleop | 9142 | ................... | 9160 | 100 |
| Z12132.1 | Marburg virus genes for vp35, vp40, vp30, vp24, glycoprotein, nucleop | 732 | ...gc..........____ | 718 | 68 |
| Z12132.1 | Marburg virus genes for vp35, vp40, vp30, vp24, glycoprotein, nucleop | 12486 | .t.........gag..c.. | 12468 | 73 |
| Z12132.1 | Marburg virus genes for vp35, vp40, vp30, vp24, glycoprotein, nucleop | 1542 | __.g.........ac..__ | 1528 | 63 |
| Z12132.1 | Marburg virus genes for vp35, vp40, vp30, vp24, glycoprotein, nucleop | 6322 | _________........._ | 6314 | 47 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 9166 | ................... | 9184 | 100 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 751 | ...gc..........____ | 737 | 68 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 1563 | .c.g.........ac..__ | 1547 | 68 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 6342 | _________........._ | 6334 | 47 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 9880 | ________.........__ | 9872 | 47 |
| AY358025.2 | Marburg virus strain M/S.Africa/Johannesburg/1975/Ozolin, complete se | 18339 | ___........._______ | 18347 | 47 |
| AY430366.1 | Lake Victoria marburgvirus strain pp4 guinea pig nonlethal variant, c | 9147 | ................... | 9165 | 100 |
| AY430366.1 | Lake Victoria marburgvirus strain pp4 guinea pig nonlethal variant, c | 732 | ...gc..........____ | 718 | 68 |
| AY430366.1 | Lake Victoria marburgvirus strain pp4 guinea pig nonlethal variant, c | 12493 | .t.........gag..c.. | 12475 | 73 |
| AY430366.1 | Lake Victoria marburgvirus strain pp4 guinea pig nonlethal variant, c | 1542 | __.g.........ac..__ | 1528 | 63 |
| AY430366.1 | Lake Victoria marburgvirus strain pp4 guinea pig nonlethal variant, c | 6323 | _________........._ | 6315 | 47 |
| AY430365.1 | Lake Victoria marburgvirus strain pp3 guinea pig lethal variant, comp | 9147 | ................... | 9165 | 100 |
| AY430365.1 | Lake Victoria marburgvirus strain pp3 guinea pig lethal variant, comp | 732 | ...gc..........____ | 718 | 68 |
| AY430365.1 | Lake Victoria marburgvirus strain pp3 guinea pig lethal variant, comp | 12493 | .t.........gag..c.. | 12475 | 73 |
| AY430365.1 | Lake Victoria marburgvirus strain pp3 guinea pig lethal variant, comp | 1542 | __.g.........ac..__ | 1528 | 63 |
| AY430365.1 | Lake Victoria marburgvirus strain pp3 guinea pig lethal variant, comp | 6323 | _________........._ | 6315 | 47 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 9147 | ................... | 9165 | 100 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 732 | ...gc..........____ | 718 | 68 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 1544 | .c.g.........ac..__ | 1528 | 68 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 6323 | _________........._ | 6315 | 47 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 9861 | ________.........__ | 9853 | 47 |
| DQ447650.1 | Lake Victoria marburgvirus - DRC1999 strain 07DRC99, complete genome | 18320 | ___........._______ | 18328 | 47 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 9147 | ................... | 9165 | 100 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 732 | ...gc..........____ | 718 | 68 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 1544 | .c.g.........ac..__ | 1528 | 68 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 6323 | _________........._ | 6315 | 47 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 9861 | ________.........__ | 9853 | 47 |
| DQ447651.1 | Lake Victoria marburgvirus - DRC1999 strain 05DRC99, complete genome | 18320 | ___........._______ | 18328 | 47 |
| EF446132.1 | Lake Victoria marburgvirus - Ci67, complete genome | 9145 | ................... | 9163 | 100 |
| EF446132.1 | Lake Victoria marburgvirus - Ci67, complete genome | 731 | ...gc..........____ | 717 | 68 |
| EF446132.1 | Lake Victoria marburgvirus - Ci67, complete genome | 1543 | .c.g.........ac..__ | 1527 | 68 |
| EF446132.1 | Lake Victoria marburgvirus - Ci67, complete genome | 17287 | _.........a._______ | 17277 | 52 |
| EF446132.1 | Lake Victoria marburgvirus - Ci67, complete genome | 6322 | _________........._ | 6314 | 47 |
| DQ447653.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1379c, complete gen | 9147 | ...g............... | 9165 | 94 |
| DQ447653.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1379c, complete gen | 727 | _____..........____ | 718 | 52 |
| DQ447653.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1379c, complete gen | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447653.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1379c, complete gen | 6323 | _________........._ | 6315 | 47 |
| DQ447654.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1381, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447654.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1381, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447654.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1381, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447654.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1381, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447655.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1386, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447655.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1386, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447655.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1386, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447655.1 | Lake Victoria marburgvirus - Angola2005 strain Ang1386, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447656.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0126, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447656.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0126, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447656.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0126, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447656.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0126, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447657.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0214, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447657.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0214, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447657.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0214, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447657.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0214, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447658.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0215, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447658.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0215, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447658.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0215, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447658.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0215, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447659.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0754, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447659.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0754, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447659.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0754, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447659.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0754, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447660.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0998, complete geno | 9147 | ...g............... | 9165 | 94 |
| DQ447660.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0998, complete geno | 727 | _____..........____ | 718 | 52 |
| DQ447660.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0998, complete geno | 1544 | .c.g.........______ | 1532 | 57 |
| DQ447660.1 | Lake Victoria marburgvirus - Angola2005 strain Ang0998, complete geno | 6323 | _________........._ | 6315 | 47 |
| DQ447649.1 | Lake Victoria marburgvirus - Ravn, complete genome | 9148 | _..g............... | 9165 | 89 |
| DQ447649.1 | Lake Victoria marburgvirus - Ravn, complete genome | 732 | ...gc..........____ | 718 | 68 |
| DQ447649.1 | Lake Victoria marburgvirus - Ravn, complete genome | 1594 | ______...g......... | 1606 | 63 |
| DQ447649.1 | Lake Victoria marburgvirus - Ravn, complete genome | 12702 | _____.a.........___ | 12692 | 52 |
| DQ447649.1 | Lake Victoria marburgvirus - Ravn, complete genome | 6323 | _________........._ | 6315 | 47 |
| DQ447652.1 | Lake Victoria marburgvirus - DRC1999 strain 09DRC99, complete genome | 9148 | _..g............... | 9165 | 89 |
| DQ447652.1 | Lake Victoria marburgvirus - DRC1999 strain 09DRC99, complete genome | 732 | ...gc..........____ | 718 | 68 |
| DQ447652.1 | Lake Victoria marburgvirus - DRC1999 strain 09DRC99, complete genome | 1594 | ______...g......... | 1606 | 63 |
| DQ447652.1 | Lake Victoria marburgvirus - DRC1999 strain 09DRC99, complete genome | 6323 | _________........._ | 6315 | 47 |
| EF446131.1 | Lake Victoria marburgvirus - Ravn, complete genome | 9148 | _..g............... | 9165 | 89 |
| EF446131.1 | Lake Victoria marburgvirus - Ravn, complete genome | 732 | ...gc..........____ | 718 | 68 |
| EF446131.1 | Lake Victoria marburgvirus - Ravn, complete genome | 1594 | ______...g......... | 1606 | 63 |
| EF446131.1 | Lake Victoria marburgvirus - Ravn, complete genome | 12702 | _____.a.........___ | 12692 | 52 |
| EF446131.1 | Lake Victoria marburgvirus - Ravn, complete genome | 6323 | _________........._ | 6315 | 47 |